Transcript: ENST00000533781.1 THYN1-008

Description

thymocyte nuclear protein 1 [Source:HGNC Symbol;Acc:29560]

Gene Synonyms

MDS012, MY105, THY28, THY28KD

Location

Chromosome 11: 134,119,783-134,121,672 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 869 variant alleles and maps to 208 oligo probes.

Gene

This transcript is a product of gene ENSG00000151500.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000341541.3	THYN1-002	1299	225aa	ENSP00000341657.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8496	Q9P016	NM_014174.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392594.3	THYN1-004	943	225aa	ENSP00000376373.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8496	Q9P016	NM_199298.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392595.2	THYN1-005	893	225aa	ENSP00000376374.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8496	Q9P016	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000352327.5	THYN1-001	835	166aa	ENSP00000341452.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8497	Q9P016	NM_199297.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525677.1	THYN1-006	377	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533975.1	THYN1-003	1074	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000531135.1	THYN1-009	926	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533781.1	THYN1-008	745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 745 bps,

Version

ENST00000533781.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000393605 (version 1)

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Transcript: ENST00000533781.1 THYN1-008

Summary