Transcript: ENST00000526910.1 PAK1-012

Description

p21 protein (Cdc42/Rac)-activated kinase 1 [Source:HGNC Symbol;Acc:8590]

Gene Synonyms

PAKalpha

Location

Chromosome 11: 77,090,240-77,103,428 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 5308 variant alleles and maps to 64 oligo probes.

Gene

This transcript is a product of gene ENSG00000149269.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000278568.4	PAK1-002	2543	553aa	ENSP00000278568.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44687	E9PJF8 E9PKH9 E9PM17 E9PMP2 E9PQW5 E9PRP6 Q13153	NM_001128620.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356341.3	PAK1-001	3737	545aa	ENSP00000348696.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8250	B7Z302 E9PJF8 E9PKH9 E9PMP2 E9PQW5 E9PRP6 Q13153	NM_002576.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530617.1	PAK1-003	3001	522aa	ENSP00000433423.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KNX7 E9PJF8 E9PKH9 E9PMP2 E9PQW5 E9PRP6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528203.1	PAK1-004	1878	455aa	ENSP00000433211.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PM17	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533285.1	PAK1-018	878	244aa	ENSP00000431541.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000528592.1	PAK1-011	581	89aa	ENSP00000433004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJF8 E9PMP2 E9PRP6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000529248.1	PAK1-009	576	106aa	ENSP00000433518.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJF8 E9PKH9 E9PMP2 E9PQW5 E9PRP6	-	-
ENST00000524847.1	PAK1-007	559	99aa	ENSP00000432477.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJF8 E9PMP2 E9PQW5 E9PRP6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526968.1	PAK1-006	502	26aa	ENSP00000433737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJF8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000528633.1	PAK1-010	450	63aa	ENSP00000435983.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJF8 E9PRP6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000527457.1	PAK1-014	1047	167aa	ENSP00000431906.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000527535.1	PAK1-019	576	18aa	ENSP00000437261.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000525542.1	PAK1-005	863	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000532991.1	PAK1-017	806	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533568.1	PAK1-008	762	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000526103.1	PAK1-016	753	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530358.1	PAK1-015	735	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533468.1	PAK1-013	503	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000526910.1	PAK1-012	348	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532711.1	PAK1-020	308	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 348 bps,

Version

ENST00000526910.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000382146 (version 1)

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Transcript: ENST00000526910.1 PAK1-012

Summary