Transcript: ENST00000471061.1 PDCD11-003

Description

programmed cell death 11 [Source:HGNC Symbol;Acc:13408]

Gene Synonyms

ALG-4, ALG4, KIAA0185, NFBP, RRP5

Location

About this transcript

This transcript has 2 exons, is associated with 892 variant alleles and maps to 86 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369797.3	PDCD11-001	6453	1871aa	ENSP00000358812.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31276	Q14690	NM_014976.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493610.2	PDCD11-002	732	38aa	ENSP00000474606.1	Nonsense mediated decay		S4R3Q4	-	-
ENST00000490787.1	PDCD11-006	101	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478543.1	PDCD11-004	717	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466959.1	PDCD11-005	500	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471061.1	PDCD11-003	410	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 410 bps,

Version

ENST00000471061.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000050153 (version 1)