Transcript: ENST00000415566.2 HMCN2-002

Description

hemicentin 2 [Source:HGNC Symbol;Acc:21293]

Gene Synonyms

DKFZp434P0216, FLJ23816

Location

Chromosome 9: 133,046,882-133,072,340 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 32 domains and features, is associated with 11531 variant alleles and maps to 484 oligo probes.

Gene

This transcript is a product of gene ENSG00000148357.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000428715.1	HMCN2-001	2801	789aa	ENSP00000387564.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0Y3X1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415566.2	HMCN2-002	2091	697aa	ENSP00000389272.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000420499.2	HMCN2-003	1781	594aa	ENSP00000389821.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000302481.1	HMCN2-201	1344	220aa	ENSP00000305590.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8NDA2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455439.2	HMCN2-004	463	155aa	ENSP00000395966.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000442930.1	HMCN2-005	421	141aa	ENSP00000413769.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000487727.2	HMCN2-006	4802	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000480829.1	HMCN2-007	2220	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000462148.1	HMCN2-008	157	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,091 bps, Translation length: 697 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000415566.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000276096 (version 2)

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Transcript: ENST00000415566.2 HMCN2-002

Summary