Transcript: ENST00000447629.2 CEP78-007

Description

centrosomal protein 78kDa [Source:HGNC Symbol;Acc:25740]

Gene Synonyms

C9orf81, FLJ12643, IP63

Location

Chromosome 9: 80,878,966-80,886,799 forward strand.

About this transcript

This transcript has 4 exons, is associated with 3334 variant alleles and maps to 201 oligo probes.

Gene

This transcript is a product of gene ENSG00000148019.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000376597.4	CEP78-008	2618	722aa	ENSP00000365782.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47984	Q5JTW2	NM_001098802.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424347.2	CEP78-001	11198	689aa	ENSP00000411284.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JTW2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415759.2	CEP78-004	2623	706aa	ENSP00000399286.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47985	Q5JTW2	NM_032171.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000277082.5	CEP78-009	2542	705aa	ENSP00000277082.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MST6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376598.2	CEP78-003	2404	705aa	ENSP00000365783.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JTW2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000487108.2	CEP78-002	915	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476652.2	CEP78-010	634	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000536374.1	CEP78-006	2975	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000447629.2	CEP78-007	1744	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000498582.2	CEP78-011	661	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000459817.2	CEP78-005	459	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,744 bps,

Version

ENST00000447629.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000052772 (version 2)

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Transcript: ENST00000447629.2 CEP78-007

Summary