Transcript: ENST00000517647.1 TRIM55-006

Description

tripartite motif containing 55 [Source:HGNC Symbol;Acc:14215]

Gene Synonyms

MURF-2, MURF2, RNF29, muRF2

Location

Chromosome 8: 67,064,533-67,087,240 forward strand.

About this transcript

This transcript has 2 exons, is associated with 9677 variant alleles and maps to 280 oligo probes.

Gene

This transcript is a product of gene ENSG00000147573.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000315962.4	TRIM55-001	2912	548aa	ENSP00000323913.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6184	Q9BYV6	NM_184085.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000353317.5	TRIM55-002	2624	452aa	ENSP00000297348.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6185	Q9BYV6	NM_184086.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000276573.7	TRIM55-004	1960	540aa	ENSP00000276573.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6187	Q9BYV6	NM_033058.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000350034.4	TRIM55-003	1177	241aa	ENSP00000332302.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6186	Q9BYV6	NM_184087.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517647.1	TRIM55-006	865	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 865 bps,

Version

ENST00000517647.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000378925 (version 1)

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Transcript: ENST00000517647.1 TRIM55-006

Summary