Transcript: ENST00000493668.1 SHROOM2-003

Description

shroom family member 2 [Source:HGNC Symbol;Acc:630]

Gene Synonyms

APXL, HSAPXL

Location

About this transcript

This transcript has 3 exons, is associated with 13384 variant alleles and maps to 89 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380913.3	SHROOM2-001	7447	1616aa	ENSP00000370299.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14135	C9IZC6 F5H3B6 Q13796	NM_001649.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418909.2	SHROOM2-201	3597	451aa	ENSP00000415229.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZC6 F5H3B6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452575.1	SHROOM2-002	2276	375aa	ENSP00000406724.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZC6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000493668.1	SHROOM2-003	855	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 855 bps,

Version

ENST00000493668.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000055723 (version 1)