Transcript: ENST00000274576.4 GLRA1-001

Description

glycine receptor, alpha 1 [Source:HGNC Symbol;Acc:4326]

Gene Synonyms

HKPX1, STHE

Location

About this transcript

This transcript has 9 exons, is annotated with 34 domains and features, is associated with 42817 variant alleles and maps to 399 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000455880.2	GLRA1-004	1707	457aa	ENSP00000411593.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54942	P23415	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000274576.4	GLRA1-001	1803	449aa	ENSP00000274576.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4320	P23415 Q14C71	NM_001146040.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545569.1	GLRA1-201	1555	366aa	ENSP00000445913.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q14C71	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000462581.2	GLRA1-002	1555	37aa	ENSP00000430595.1	Nonsense mediated decay		E5RJ70	-	-
ENST00000471351.2	GLRA1-003	1802	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,803 bps, Translation length: 449 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P23415

CCDS

This transcript is a member of the Human CCDS set: CCDS4320

Version

ENST00000274576.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252429 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.