Transcript: ENST00000488633.1 CIAO1-001

Description

cytosolic iron-sulfur protein assembly 1 [Source:HGNC Symbol;Acc:14280]

Gene Synonyms

CIA1, WDR39

Location

About this transcript

This transcript has 7 exons, is annotated with 29 domains and features, is associated with 2882 variant alleles and maps to 366 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000488633.1	CIAO1-001	1533	339aa	ENSP00000418287.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2019	O76071	NM_004804.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000469320.1	CIAO1-003	565	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000272402.2	CIAO1-002	3588	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491394.1	CIAO1-004	748	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,533 bps, Translation length: 339 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O76071

CCDS

This transcript is a member of the Human CCDS set: CCDS2019

Version

ENST00000488633.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252843 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.