Transcript: ENST00000489159.1 ADAMTSL4-003

Description

ADAMTS-like 4 [Source:HGNC Symbol;Acc:19706]

Gene Synonyms

ADAMTSL-4, DKFZP434K1772, ECTOL2, TSRC1

Location

Chromosome 1: 150,530,730-150,533,413 forward strand.

About this transcript

This transcript has 5 exons, is associated with 1605 variant alleles and maps to 268 oligo probes.

Gene

This transcript is a product of gene ENSG00000143382.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000271643.4	ADAMTSL4-201	4197	1074aa	ENSP00000271643.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS955	A8KAH2 Q6UY14 Q9UFG7	NM_019032.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369038.2	ADAMTSL4-001	4167	1074aa	ENSP00000358034.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS955	A8KAH2 Q6UY14 Q9UFG7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369039.5	ADAMTSL4-202	3906	1097aa	ENSP00000358035.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8KAH2 F8WAD0 Q9UFG7	NM_001288608.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369041.5	ADAMTSL4-002	2908	877aa	ENSP00000358037.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30852	Q6UY14	NM_025008.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483335.1	ADAMTSL4-004	1826	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489159.1	ADAMTSL4-003	1803	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,803 bps,

Version

ENST00000489159.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000084397 (version 2)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000489159.1 ADAMTSL4-003

Summary