Transcript: ENST00000511750.1 SLC6A3-004

Description

solute carrier family 6 (neurotransmitter transporter), member 3 [Source:HGNC Symbol;Acc:11049]

Gene Synonyms

DAT, DAT1, PKDYS

Location

Chromosome 5: 1,414,856-1,416,693 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 1034 variant alleles and maps to 65 oligo probes.

Gene

This transcript is a product of gene ENSG00000142319.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000270349.9	SLC6A3-001	3932	620aa	ENSP00000270349.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3863	H0YBA7 Q01959 Q6LC27	NM_001044.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453492.2	SLC6A3-201	2770	620aa	ENSP00000399806.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3863	H0YBA7 Q01959 Q6LC27	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512002.1	SLC6A3-003	950	81aa	ENSP00000430324.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000513308.1	SLC6A3-002	879	270aa	ENSP00000429101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YBA7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000511750.1	SLC6A3-004	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 556 bps,

Version

ENST00000511750.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000365927 (version 1)

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Transcript: ENST00000511750.1 SLC6A3-004

Summary