Transcript: ENST00000526573.1 POLG-006

Description

polymerase (DNA directed), gamma [Source:HGNC Symbol;Acc:9179]

Gene Synonyms

MDP1, MIRAS, MTDPS4A, MTDPS4B, PEO, POLG1, POLGA, SANDO, SCAE

Location

Chromosome 15: 89,866,745-89,868,715 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 2917 variant alleles and maps to 102 oligo probes.

Gene

This transcript is a product of gene ENSG00000140521.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000268124.5	POLG-001	4502	1239aa	ENSP00000268124.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10350	E5KNU5 P54098 Q2V8X9 Q6LCA9	NM_002693.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442287.2	POLG-002	4487	1239aa	ENSP00000399851.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10350	E5KNU5 P54098 Q2V8X9 Q6LCA9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526314.1	POLG-013	686	228aa	ENSP00000432389.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YCV2	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000530292.1	POLG-009	1315	196aa	ENSP00000432885.1	Nonsense mediated decay		H0YD36	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000528881.2	POLG-012	524	69aa	ENSP00000433502.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000526398.1	POLG-005	512	51aa	ENSP00000434937.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000530715.1	POLG-008	372	68aa	ENSP00000431395.1	Nonsense mediated decay		H0YCD2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000525806.1	POLG-011	195	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526671.1	POLG-010	764	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532584.1	POLG-004	708	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533857.1	POLG-007	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000526573.1	POLG-006	544	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532363.1	POLG-003	431	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 544 bps,

Version

ENST00000526573.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000395122 (version 1)

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Transcript: ENST00000526573.1 POLG-006

Summary