Transcript: ENST00000418714.1 SLC40A1-008

Description

solute carrier family 40 (iron-regulated transporter), member 1 [Source:HGNC Symbol;Acc:10909]

Gene Synonyms

FPN1, HFE4, IREG1, MST079, MTP1, SLC11A3

Location

Chromosome 2: 190,439,887-190,445,509 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 2407 variant alleles and maps to 211 oligo probes.

Gene

This transcript is a product of gene ENSG00000138449.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261024.2	SLC40A1-001	3442	571aa	ENSP00000261024.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2299	E7EQF8 E7ES28 Q4PNE6 Q9NP59	NM_014585.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427241.1	SLC40A1-002	824	200aa	ENSP00000390005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQF8 E7ES28 Q4PNE6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000455320.1	SLC40A1-004	592	55aa	ENSP00000413549.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQF8 Q4PNE6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000427419.1	SLC40A1-003	299	25aa	ENSP00000392730.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4PNE2 Q4PNE3 Q4PNE4 Q4PNE6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000440626.1	SLC40A1-005	209	25aa	ENSP00000396134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4PNE2 Q4PNE3 Q4PNE4 Q4PNE6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000418714.1	SLC40A1-008	712	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479598.1	SLC40A1-006	993	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 712 bps,

Version

ENST00000418714.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000335044 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000418714.1 SLC40A1-008

Summary