Transcript: ENST00000498146.1 HECW2-005

Description

HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:29853]

Gene Synonyms

KIAA1301, NEDL2

Location

Chromosome 2: 197,105,184-197,106,979 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 838 variant alleles and maps to 46 oligo probes.

Gene

This transcript is a product of gene ENSG00000138411.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000260983.3	HECW2-001	11809	1572aa	ENSP00000260983.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33354	C9JHL2 C9JPI9 Q9P2P5	NM_020760.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409111.1	HECW2-002	6690	1216aa	ENSP00000386775.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9P2P5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452031.1	HECW2-003	620	133aa	ENSP00000409918.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JHL2 C9JPI9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000427457.1	HECW2-004	568	118aa	ENSP00000395770.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JHL2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000462290.1	HECW2-006	523	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000498146.1	HECW2-005	275	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 275 bps,

Version

ENST00000498146.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000335317 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000498146.1 HECW2-005

Summary