Transcript: ENST00000449792.1 MDH1B-005

Description

malate dehydrogenase 1B, NAD (soluble) [Source:HGNC Symbol;Acc:17836]

Gene Synonyms

FLJ25341, RP11-95H11

Location

Chromosome 2: 207,602,949-207,630,050 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 7 domains and features, is associated with 11366 variant alleles and maps to 392 oligo probes.

Gene

This transcript is a product of gene ENSG00000138400.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374412.3	MDH1B-001	2553	518aa	ENSP00000363533.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33365	B4DY40 C9JER5 Q5I0G3	NM_001039845.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454776.2	MDH1B-006	1795	517aa	ENSP00000389916.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63102	B4DY40 Q5I0G3	NM_001282940.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449792.1	MDH1B-005	1757	420aa	ENSP00000416577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JER5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392214.2	MDH1B-201	1128	283aa	ENSP00000376049.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DY40 Q5I0G3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432911.1	MDH1B-002	1874	283aa	ENSP00000392464.1	Nonsense mediated decay		B4DY40 Q5I0G3	-	-
ENST00000436472.1	MDH1B-004	911	133aa	ENSP00000403810.1	Nonsense mediated decay		B4DY40	-	-
ENST00000471988.1	MDH1B-008	722	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 9, Transcript length: 1,757 bps, Translation length: 420 residues

Version

ENST00000449792.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000336795 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000449792.1 MDH1B-005

Summary