Transcript: ENST00000477557.3 DBR1-004

Description

debranching RNA lariats 1 [Source:HGNC Symbol;Acc:15594]

Location

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 4936 variant alleles and maps to 186 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000260803.4	DBR1-001	2666	544aa	ENSP00000260803.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33863	F5GWV2 Q9UK59	NM_016216.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505015.2	DBR1-201	2189	310aa	ENSP00000441945.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GWV2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000477557.3	DBR1-004	838	118aa	ENSP00000417262.3	Nonsense mediated decay		F8WAY1	-	-
ENST00000463982.2	DBR1-002	623	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460271.1	DBR1-003	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 838 bps, Translation length: 118 residues

Version

ENST00000477557.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000357588 (version 2)