Transcript: ENST00000409740.3 SLC3A1-007

Description

solute carrier family 3 (amino acid transporter heavy chain), member 1 [Source:HGNC Symbol;Acc:11025]

Gene Synonyms

ATR1, CSNU1, D2H, NBAT, RBAT

Location

Chromosome 2: 44,530,945-44,547,937 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 11267 variant alleles and maps to 207 oligo probes.

Gene

This transcript is a product of gene ENSG00000138079.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000260649.6	SLC3A1-001	2989	685aa	ENSP00000260649.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1819	E7ENC4 Q07837	NM_000341.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409229.3	SLC3A1-005	2909	564aa	ENSP00000386620.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZP2 Q4J6B5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409380.1	SLC3A1-006	2424	407aa	ENSP00000386709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ENC4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409387.1	SLC3A1-002	2327	564aa	ENSP00000387308.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZK1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409741.1	SLC3A1-004	1537	502aa	ENSP00000386954.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4J6B6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000410056.3	SLC3A1-003	1426	391aa	ENSP00000387337.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4J6B8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409740.3	SLC3A1-007	1418	316aa	ENSP00000386677.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PC38	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409294.1	SLC3A1-009	792	184aa	ENSP00000386852.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZP2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427285.1	SLC3A1-008	574	143aa	ENSP00000391642.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JBK3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,418 bps, Translation length: 316 residues

Version

ENST00000409740.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000327840 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000409740.3 SLC3A1-007

Summary