Transcript: ENST00000543644.1 FCHSD2-010

Description

FCH and double SH3 domains 2 [Source:HGNC Symbol;Acc:29114]

Gene Synonyms

KIAA0769, NWK, SH3MD3

Location

Chromosome 11: 72,694,810-72,700,057 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 2137 variant alleles and maps to 76 oligo probes.

Gene

This transcript is a product of gene ENSG00000137478.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409418.4	FCHSD2-002	3154	740aa	ENSP00000386722.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8218	C9JM66 O94868	NM_014824.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409314.1	FCHSD2-003	4509	764aa	ENSP00000386987.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JM66 E7ENZ2 E9PG19	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000311172.7	FCHSD2-001	4340	684aa	ENSP00000308978.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O94868	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458644.2	FCHSD2-008	2215	604aa	ENSP00000402972.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ENZ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409853.1	FCHSD2-004	1867	515aa	ENSP00000386314.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O94868	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409263.1	FCHSD2-007	932	101aa	ENSP00000386903.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZW8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422375.1	FCHSD2-005	587	140aa	ENSP00000408706.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JM66	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000543644.1	FCHSD2-010	321	85aa	ENSP00000441616.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000432043.2	FCHSD2-009	578	117aa	ENSP00000406420.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 321 bps, Translation length: 85 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000543644.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000397328 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000543644.1 FCHSD2-010

Summary