Transcript: ENST00000495934.2 C9orf78-003

Description

chromosome 9 open reading frame 78 [Source:HGNC Symbol;Acc:24932]

Gene Synonyms

HCA59, HSPC220, bA409K20.3

Location

About this transcript

This transcript has 3 exons, is associated with 1119 variant alleles and maps to 153 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372447.3	C9orf78-007	1795	289aa	ENSP00000361524.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6931	Q9NZ63	NM_016520.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000461762.1	C9orf78-002	2390	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480023.1	C9orf78-001	2143	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461349.1	C9orf78-006	783	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461539.1	C9orf78-004	637	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492991.1	C9orf78-005	478	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495934.2	C9orf78-003	472	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 472 bps,

Version

ENST00000495934.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000054621 (version 2)