Transcript: ENST00000366960.3 RPS6KC1-001

Description

ribosomal protein S6 kinase, 52kDa, polypeptide 1 [Source:HGNC Symbol;Acc:10439]

Gene Synonyms

RPK118, S6K-delta-1, S6PKh1, humS6PKh1

Location

Chromosome 1: 213,224,597-213,448,116 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 24 domains and features, is associated with 94608 variant alleles and maps to 667 oligo probes.

Gene

This transcript is a product of gene ENSG00000136643.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000366960.3	RPS6KC1-001	5490	1066aa	ENSP00000355927.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1513	Q96S38	NM_012424.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366959.3	RPS6KC1-002	5454	1054aa	ENSP00000355926.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44317	Q96S38	NM_001287221.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543470.1	RPS6KC1-202	3533	854aa	ENSP00000442306.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H7T0	NM_001287219.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543354.1	RPS6KC1-201	3032	660aa	ENSP00000439282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DHE1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490299.1	RPS6KC1-003	5154	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468069.1	RPS6KC1-004	784	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491616.1	RPS6KC1-005	778	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 5,490 bps, Translation length: 1,066 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96S38

CCDS

This transcript is a member of the Human CCDS set: CCDS1513

Version

ENST00000366960.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000089690 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000366960.3 RPS6KC1-001

Summary