Transcript: ENST00000444272.1 SYNCRIP-003

Description

synaptotagmin binding, cytoplasmic RNA interacting protein [Source:HGNC Symbol;Acc:16918]

Gene Synonyms

GRY-RBP, GRYRBP, HNRNPQ, HNRPQ, HNRPQ1, NSAP1, PP68, dJ3J17.2, hnRNP-Q

Location

About this transcript

This transcript has 6 exons, is annotated with 2 domains and features, is associated with 4238 variant alleles and maps to 131 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369622.3	SYNCRIP-001	3023	623aa	ENSP00000358635.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5005	F6UXX1 O60506	NM_006372.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355238.6	SYNCRIP-002	6443	562aa	ENSP00000347380.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55041	B7Z645 F6UXX1 O60506	NM_001253771.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444272.1	SYNCRIP-003	610	185aa	ENSP00000397782.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6UXX1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 610 bps, Translation length: 185 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000444272.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000041398 (version 1)