Transcript: ENST00000543336.1 PIWIL4-002

Description

piwi-like RNA-mediated gene silencing 4 [Source:HGNC Symbol;Acc:18444]

Gene Synonyms

FLJ36156, HIWI2, MIWI2, Miwi2, PIWI

Location

About this transcript

This transcript has 14 exons, is annotated with 9 domains and features, is associated with 29621 variant alleles and maps to 314 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000299001.6	PIWIL4-001	3199	852aa	ENSP00000299001.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31656	F5GX26 Q7Z3Z4	NM_152431.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537419.1	PIWIL4-004	831	203aa	ENSP00000439710.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H116	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545603.1	PIWIL4-005	587	118aa	ENSP00000440499.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GX26	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000446230.2	PIWIL4-003	3759	495aa	ENSP00000413838.2	Nonsense mediated decay		F5GX26 Q7Z3Z4	-	-
ENST00000543336.1	PIWIL4-002	1901	453aa	ENSP00000444575.1	Nonsense mediated decay		F5GX26 Q7Z3Z4	-	-

Summary

Statistics

Exons: 14, Coding exons: 11, Transcript length: 1,901 bps, Translation length: 453 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7Z3Z4

Version

ENST00000543336.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000396386 (version 1)