Transcript: ENST00000379215.4 ECHDC3-001

Description

enoyl CoA hydratase domain containing 3 [Source:HGNC Symbol;Acc:23489]

Gene Synonyms

FLJ20909

Location

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 10151 variant alleles and maps to 305 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379215.4	ECHDC3-001	1649	303aa	ENSP00000368517.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7084	Q5W0J6 Q96DC8	NM_024693.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420401.1	ECHDC3-004	854	241aa	ENSP00000405584.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5W0J8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000422887.1	ECHDC3-005	623	166aa	ENSP00000398429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5W0J6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000496136.1	ECHDC3-002	1767	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495787.1	ECHDC3-003	505	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,649 bps, Translation length: 303 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96DC8

CCDS

This transcript is a member of the Human CCDS set: CCDS7084

Version

ENST00000379215.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000046771 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.