Transcript: ENST00000534662.1 SWAP70-006

Description

SWAP switching B-cell complex 70kDa subunit [Source:HGNC Symbol;Acc:17070]

Gene Synonyms

KIAA0640, SWAP-70

Location

Chromosome 11: 9,741,613-9,759,806 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 11 domains and features, is associated with 7901 variant alleles and maps to 119 oligo probes.

Gene

This transcript is a product of gene ENSG00000133789.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000318950.6	SWAP70-001	4882	585aa	ENSP00000315630.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31426	E9PJM7 Q9UH65	NM_015055.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447399.2	SWAP70-002	3538	527aa	ENSP00000399056.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EMB1 E9PJM7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534662.1	SWAP70-006	1131	226aa	ENSP00000435587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJM7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000534562.1	SWAP70-007	977	23aa	ENSP00000433824.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000526358.1	SWAP70-004	813	149aa	ENSP00000431768.1	Nonsense mediated decay		E9PJK8	-	-
ENST00000524817.1	SWAP70-003	3006	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000531814.1	SWAP70-005	716	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,131 bps, Translation length: 226 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000534662.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000386798 (version 1)

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Transcript: ENST00000534662.1 SWAP70-006

Summary