Transcript: ENST00000522770.1 LRRCC1-003

Description

leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:29373]

Gene Synonyms

CLERC, KIAA1764, SAP2, VFL1

Location

About this transcript

This transcript has 15 exons, is annotated with 1 domain and feature, is associated with 12493 variant alleles and maps to 421 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360375.3	LRRCC1-001	3813	1032aa	ENSP00000353538.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43750	Q9C099	NM_033402.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414626.2	LRRCC1-006	4493	1012aa	ENSP00000394695.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9C099	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522770.1	LRRCC1-003	2800	35aa	ENSP00000428506.1	Nonsense mediated decay		E5RI08	-	-
ENST00000517875.1	LRRCC1-002	2385	36aa	ENSP00000430960.1	Nonsense mediated decay		E5RGA4 E5RI08	-	-
ENST00000522567.1	LRRCC1-005	2122	36aa	ENSP00000428794.1	Nonsense mediated decay		E5RGA4 E5RI08	-	-
ENST00000523669.1	LRRCC1-004	1004	36aa	ENSP00000430878.1	Nonsense mediated decay		E5RGA4 E5RI08	-	-

Summary

Statistics

Exons: 15, Coding exons: 1, Transcript length: 2,800 bps, Translation length: 35 residues

Version

ENST00000522770.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000380271 (version 1)