Transcript: ENST00000382909.1 ZMYM5-002

Description

zinc finger, MYM-type 5 [Source:HGNC Symbol;Acc:13029]

Gene Synonyms

HSPC050, MYM, ZNF198L1, ZNF237

Location

Chromosome 13: 20,397,622-20,425,936 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 13219 variant alleles and maps to 443 oligo probes.

Gene

This transcript is a product of gene ENSG00000132950.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000382905.4	ZMYM5-003	1382	382aa	ENSP00000372361.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31942	Q9UJ78	NM_001039650.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000337963.4	ZMYM5-201	3268	669aa	ENSP00000337034.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YH25 Q9UJ78	NM_001142684.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502168.2	ZMYM5-006	2604	659aa	ENSP00000445779.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YH25	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000382907.4	ZMYM5-001	1092	208aa	ENSP00000372364.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31943	Q9UJ78	NM_001039649.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535942.1	ZMYM5-007	3200	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000382909.1	ZMYM5-002	2861	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467542.1	ZMYM5-004	1622	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495534.1	ZMYM5-005	1336	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 2,861 bps,

Version

ENST00000382909.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000044043 (version 1)

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Transcript: ENST00000382909.1 ZMYM5-002

Summary