Transcript: ENST00000517940.1 AP3B1-009

Description

adaptor-related protein complex 3, beta 1 subunit [Source:HGNC Symbol;Acc:566]

Gene Synonyms

ADTB3, ADTB3A, HPS, HPS2, PE

Location

Chromosome 5: 77,384,805-77,412,011 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 11849 variant alleles and maps to 143 oligo probes.

Gene

This transcript is a product of gene ENSG00000132842.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000255194.6	AP3B1-001	5838	1094aa	ENSP00000255194.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4041	E5RJ68 O00203	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519295.1	AP3B1-002	3986	1045aa	ENSP00000430597.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS64186	E5RJ68	NM_003664.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522901.1	AP3B1-007	1170	154aa	ENSP00000429228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000523204.1	AP3B1-006	776	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519888.1	AP3B1-005	519	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000517561.1	AP3B1-004	498	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000517940.1	AP3B1-009	974	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520122.1	AP3B1-008	525	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 974 bps,

Version

ENST00000517940.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000369912 (version 1)

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Transcript: ENST00000517940.1 AP3B1-009

Summary