Transcript: ENST00000456112.1 HAPLN2-004

Description

hyaluronan and proteoglycan link protein 2 [Source:HGNC Symbol;Acc:17410]

Gene Synonyms

BRAL1

Location

About this transcript

This transcript has 5 exons, is annotated with 13 domains and features, is associated with 2418 variant alleles and maps to 276 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000255039.1	HAPLN2-001	1771	340aa	ENSP00000255039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1148	Q5T3J0 Q5T3J1 Q9GZV7	NM_021817.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456112.1	HAPLN2-004	882	185aa	ENSP00000388835.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T3J1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000494218.1	HAPLN2-005	1022	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487988.1	HAPLN2-002	719	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482204.1	HAPLN2-003	679	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 882 bps, Translation length: 185 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000456112.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000081042 (version 2)