Transcript: ENST00000571047.1 KDM6B-004

Description

lysine (K)-specific demethylase 6B [Source:HGNC Symbol;Acc:29012]

Gene Synonyms

JMJD3, KIAA0346

Location

Chromosome 17: 7,743,222-7,748,665 forward strand.

About this transcript

This transcript has 4 exons, is associated with 3129 variant alleles and maps to 126 oligo probes.

Gene

This transcript is a product of gene ENSG00000132510.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000254846.5	KDM6B-001	6713	1682aa	ENSP00000254846.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32552	D3DTQ7 O15054	NM_001080424.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448097.2	KDM6B-002	5422	1643aa	ENSP00000412513.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O15054	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000570632.1	KDM6B-003	1339	361aa	ENSP00000458445.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L0Z0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000572030.1	KDM6B-006	432	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000571047.1	KDM6B-004	362	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000575521.1	KDM6B-005	219	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 362 bps,

Version

ENST00000571047.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000440246 (version 1)

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Transcript: ENST00000571047.1 KDM6B-004

Summary