Transcript: ENST00000588932.1 CC2D1A-008

Description

coiled-coil and C2 domain containing 1A [Source:HGNC Symbol;Acc:30237]

Gene Synonyms

AKI1, FLJ20241, FREUD-1, Freud-1/Aki1, MRT3

Location

Chromosome 19: 14,031,090-14,034,566 forward strand.

About this transcript

This transcript has 5 exons, is associated with 1628 variant alleles and maps to 171 oligo probes.

Gene

This transcript is a product of gene ENSG00000132024.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000318003.7	CC2D1A-001	3581	951aa	ENSP00000313601.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42512	Q6P1N0	NM_017721.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589606.1	CC2D1A-010	3117	950aa	ENSP00000467526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6P1N0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587508.1	CC2D1A-005	1667	405aa	ENSP00000466586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000586955.1	CC2D1A-006	2743	378aa	ENSP00000465376.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000589138.1	CC2D1A-004	2435	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000585896.1	CC2D1A-002	1843	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589224.1	CC2D1A-009	809	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588932.1	CC2D1A-008	806	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589679.1	CC2D1A-007	610	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 806 bps,

Version

ENST00000588932.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000457961 (version 1)

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Transcript: ENST00000588932.1 CC2D1A-008

Summary