Transcript: ENST00000412910.1 C3orf20-004

Description

chromosome 3 open reading frame 20 [Source:HGNC Symbol;Acc:25320]

Gene Synonyms

DKFZP434N1817

Location

About this transcript

This transcript has 17 exons, is annotated with 3 domains and features, is associated with 41116 variant alleles and maps to 456 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000253697.3	C3orf20-001	3326	904aa	ENSP00000253697.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33706	Q8ND61	NM_032137.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435614.1	C3orf20-003	2858	782aa	ENSP00000402933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54555	Q8ND61	NM_001184958.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412910.1	C3orf20-004	2744	782aa	ENSP00000396081.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54555	Q8ND61	NM_001184957.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000495387.1	C3orf20-005	836	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 15, Transcript length: 2,744 bps, Translation length: 782 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8ND61

CCDS

This transcript is a member of the Human CCDS set: CCDS54555

Version

ENST00000412910.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000340589 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.