Transcript: ENST00000494115.1 LRRC4-004

Description

leucine rich repeat containing 4 [Source:HGNC Symbol;Acc:15586]

Gene Synonyms

BAG, NAG14, NGL-2

Location

About this transcript

This transcript has 2 exons, is annotated with 8 domains and features, is associated with 553 variant alleles and maps to 113 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000249363.3	LRRC4-001	3828	653aa	ENSP00000249363.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5799	C9J7K7 C9J7V8 C9JA92 Q9HBW1	NM_022143.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000476782.1	LRRC4-002	561	94aa	ENSP00000418093.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7K7 C9JA92	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000494115.1	LRRC4-004	557	78aa	ENSP00000418254.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7V8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000478726.1	LRRC4-003	451	50aa	ENSP00000417795.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7K7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 557 bps, Translation length: 78 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000494115.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000349173 (version 1)