Transcript: ENST00000515876.1 TMEM175-005

Description

transmembrane protein 175 [Source:HGNC Symbol;Acc:28709]

Gene Synonyms

MGC4618

Location

Chromosome 4: 926,249-949,732 forward strand.

About this transcript

This transcript has 10 exons, is associated with 11682 variant alleles and maps to 304 oligo probes.

Gene

This transcript is a product of gene ENSG00000127419.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264771.4	TMEM175-001	1860	504aa	ENSP00000264771.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3341	D3DVN5 D6RBE5 D6RIZ2 E7ETE6 Q9BSA9	NM_032326.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515740.1	TMEM175-006	1514	388aa	ENSP00000427039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BSA9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508204.1	TMEM175-007	1399	422aa	ENSP00000423669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3DVN5 D6RBE5 E7ETE6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510493.1	TMEM175-014	1006	284aa	ENSP00000424208.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBE5 E7ETE6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000515492.1	TMEM175-018	784	212aa	ENSP00000425867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ETE6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000514453.1	TMEM175-013	683	179aa	ENSP00000425181.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RDY8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000509508.1	TMEM175-010	621	162aa	ENSP00000421750.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAJ5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000514546.1	TMEM175-015	619	133aa	ENSP00000425763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RIZ2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507319.1	TMEM175-019	525	113aa	ENSP00000424746.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAU7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000513952.1	TMEM175-008	2084	72aa	ENSP00000427218.1	Nonsense mediated decay		D6RCD9	-	-
ENST00000504744.1	TMEM175-020	776	72aa	ENSP00000423751.1	Nonsense mediated decay		D6RCD9	-	-
ENST00000513682.1	TMEM175-012	581	77aa	ENSP00000427626.1	Nonsense mediated decay		D6RHV8	-	-
ENST00000504180.1	TMEM175-017	673	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000438836.2	TMEM175-002	2236	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000452360.2	TMEM175-004	2011	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515876.1	TMEM175-005	1007	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505734.1	TMEM175-003	990	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000504850.1	TMEM175-016	984	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000504505.1	TMEM175-011	583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000502513.1	TMEM175-021	412	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000506669.1	TMEM175-022	292	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 0, Transcript length: 1,007 bps,

Version

ENST00000515876.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000358839 (version 1)

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Transcript: ENST00000515876.1 TMEM175-005

Summary