Transcript: ENST00000442623.1 TRPV5-002

Description

transient receptor potential cation channel, subfamily V, member 5 [Source:HGNC Symbol;Acc:3145]

Gene Synonyms

CAT2, CaT2, ECAC1, OTRPC3

Location

About this transcript

This transcript has 8 exons, is annotated with 24 domains and features, is associated with 4390 variant alleles and maps to 298 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265310.1	TRPV5-001	2952	729aa	ENSP00000265310.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5875	Q9H480 Q9NQA5	NM_019841.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442623.1	TRPV5-002	2120	381aa	ENSP00000406572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PBZ6 Q9H480	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439304.1	TRPV5-003	2025	674aa	ENSP00000406361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C2J6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,120 bps, Translation length: 381 residues

Version

ENST00000442623.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000347661 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.