Transcript: ENST00000372562.1 PPCS-003

Description

phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:25686]

Gene Synonyms

COAB, FLJ11838

Location

Chromosome 1: 42,921,788-42,925,752 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 2101 variant alleles and maps to 232 oligo probes.

Gene

This transcript is a product of gene ENSG00000127125.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372561.3	PPCS-001	1431	311aa	ENSP00000361642.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41311	Q9HAB8	NM_024664.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455780.1	PPCS-201	1044	138aa	ENSP00000389893.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41312	Q9HAB8	NM_001077447.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372556.3	PPCS-002	984	56aa	ENSP00000361637.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VVM2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372562.1	PPCS-003	966	138aa	ENSP00000361643.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41312	Q9HAB8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372560.3	PPCS-005	793	213aa	ENSP00000361641.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VVM3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472013.1	PPCS-007	1617	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469615.1	PPCS-004	778	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482168.1	PPCS-006	688	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471420.1	PPCS-008	641	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 966 bps, Translation length: 138 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HAB8

CCDS

This transcript is a member of the Human CCDS set: CCDS41312

Version

ENST00000372562.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000019168 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000372562.1 PPCS-003

Summary