Transcript: ENST00000372584.1 HIVEP3-001

Description

human immunodeficiency virus type I enhancer binding protein 3 [Source:HGNC Symbol;Acc:13561]

Gene Synonyms

FLJ16752, KBP-1, KBP1, KIAA1555, KRC, SHN3, Schnurri-3, ZAS3, ZNF40C

Location

Chromosome 1: 41,972,036-42,384,378 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 51 domains and features, is associated with 172726 variant alleles and maps to 737 oligo probes.

Gene

This transcript is a product of gene ENSG00000127124.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372583.1	HIVEP3-002	12193	2406aa	ENSP00000361664.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS463	Q5T1R4	NM_024503.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372584.1	HIVEP3-001	12319	2405aa	ENSP00000361665.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44124	Q5T1R4	NM_001127714.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000247584.5	HIVEP3-201	8465	2406aa	ENSP00000247584.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS463	Q5T1R4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429157.2	HIVEP3-202	8024	2405aa	ENSP00000410828.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44124	Q5T1R4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460604.1	HIVEP3-003	2369	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491442.1	HIVEP3-005	1731	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489103.1	HIVEP3-004	1705	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479350.1	HIVEP3-006	940	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 12,319 bps, Translation length: 2,405 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5T1R4

CCDS

This transcript is a member of the Human CCDS set: CCDS44124

Version

ENST00000372584.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000016977 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000372584.1 HIVEP3-001

Summary