Transcript: ENST00000477239.1 GZF1-001

Description

GDNF-inducible zinc finger protein 1 [Source:HGNC Symbol;Acc:15808]

Gene Synonyms

ZBTB23, ZNF336, dJ322G13.2

Location

Chromosome 20: 23,349,508-23,351,058 forward strand.

About this transcript

This transcript has 2 exons, is associated with 883 variant alleles and maps to 116 oligo probes.

Gene

This transcript is a product of gene ENSG00000125812.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000338121.5	GZF1-003	4835	711aa	ENSP00000338290.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13151	B4DF58 F5H2R0 Q5JXG1 Q9H116	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377051.2	GZF1-201	4740	711aa	ENSP00000366250.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13151	B4DF58 F5H2R0 Q5JXG1 Q9H116	NM_022482.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544236.1	GZF1-203	989	235aa	ENSP00000445458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DF58 F5H2R0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542987.1	GZF1-202	951	220aa	ENSP00000445118.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DF58	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424216.1	GZF1-004	795	48aa	ENSP00000410009.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JXG1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000461789.1	GZF1-002	675	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477239.1	GZF1-001	390	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 390 bps,

Version

ENST00000477239.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000078331 (version 2)

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Transcript: ENST00000477239.1 GZF1-001

Summary