Transcript: ENST00000581334.1 MED1-005

Description

mediator complex subunit 1 [Source:HGNC Symbol;Acc:9234]

Gene Synonyms

CRSP1, CRSP200, DRIP205, DRIP230, PBP, PPARBP, PPARGBP, RB18A, TRAP220, TRIP2

Location

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 3790 variant alleles and maps to 76 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000300651.6	MED1-001	5844	1581aa	ENSP00000300651.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11336	Q15648	NM_004774.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394287.3	MED1-002	2870	556aa	ENSP00000377828.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q15648	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000577831.1	MED1-003	4584	97aa	ENSP00000463307.1	Nonsense mediated decay		J3QKZ7	-	-
ENST00000581334.1	MED1-005	580	79aa	ENSP00000462441.1	Nonsense mediated decay		J3KSD7	-	-
ENST00000584308.1	MED1-004	467	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 580 bps, Translation length: 79 residues

Version

ENST00000581334.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000444183 (version 1)