Transcript: ENST00000551273.1 IFT81-005

Description

intraflagellar transport 81 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:14313]

Gene Synonyms

CDV-1, CDV-1R, CDV1, CDV1R, DV1, MGC4027

Location

Chromosome 12: 110,570,398-110,600,870 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 4 domains and features, is associated with 12274 variant alleles and maps to 114 oligo probes.

Gene

This transcript is a product of gene ENSG00000122970.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000242591.5	IFT81-003	3108	676aa	ENSP00000242591.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41831	Q8WYA0	NM_014055.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361948.4	IFT81-001	3048	431aa	ENSP00000355372.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9142	Q8WYA0	NM_031473.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552912.1	IFT81-002	2710	676aa	ENSP00000449718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41831	Q8WYA0	NM_001143779.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546374.1	IFT81-004	1171	366aa	ENSP00000446950.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W1J4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000550156.1	IFT81-008	2694	624aa	ENSP00000446895.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000551273.1	IFT81-005	549	104aa	ENSP00000449964.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000549009.1	IFT81-009	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000551055.1	IFT81-006	484	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000550748.1	IFT81-007	2829	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 549 bps, Translation length: 104 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000551273.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000403532 (version 1)

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Transcript: ENST00000551273.1 IFT81-005

Summary