Transcript: ENST00000497400.1 NXPH1-002

Description

neurexophilin 1 [Source:HGNC Symbol;Acc:20693]

Gene Synonyms

NPH1

Location

Chromosome 7: 8,729,917-8,791,617 forward strand.

About this transcript

This transcript has 2 exons, is associated with 33034 variant alleles and maps to 215 oligo probes.

Gene

This transcript is a product of gene ENSG00000122584.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000405863.1	NXPH1-001	2921	271aa	ENSP00000384551.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47540	B4DJV1 C9JE46 C9JPD0 P58417 Q3LID8	NM_152745.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602349.1	NXPH1-201	1287	154aa	ENSP00000473269.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DJV1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429542.1	NXPH1-004	949	143aa	ENSP00000408216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JE46 C9JPD0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000438764.1	NXPH1-003	568	139aa	ENSP00000404689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JE46	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000497400.1	NXPH1-002	1039	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,039 bps,

Version

ENST00000497400.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000324592 (version 1)

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Transcript: ENST00000497400.1 NXPH1-002

Summary