Transcript: ENST00000462255.1 PIK3CA-004

Description

phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha [Source:HGNC Symbol;Acc:8975]

Gene Synonyms

CLOVE, CWS5, MCAP, MCM, MCMTC, PI3K, p110-alpha

Location

About this transcript

This transcript has 6 exons, is associated with 4216 variant alleles and maps to 254 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263967.3	PIK3CA-001	9093	1068aa	ENSP00000263967.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43171	C9J951 C9JAM9 P42336 Q4LE51	NM_006218.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000468036.1	PIK3CA-003	620	118aa	ENSP00000417479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J951 C9JAM9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000477735.1	PIK3CA-002	245	21aa	ENSP00000418145.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J951	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000462255.1	PIK3CA-004	746	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 746 bps,

Version

ENST00000462255.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000348480 (version 1)