Transcript: ENST00000394009.3 CCDC176-001

Description

coiled-coil domain containing 176 [Source:HGNC Symbol;Acc:19855]

Gene Synonyms

BBOF1, C14orf45

Location

Chromosome 14: 74,486,059-74,532,795 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 8 domains and features, is associated with 20182 variant alleles and maps to 427 oligo probes.

Gene

This transcript is a product of gene ENSG00000119636.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394009.3	CCDC176-001	3106	529aa	ENSP00000377577.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32119	G3V488 Q8ND07	NM_025057.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553773.1	CCDC176-201	1715	265aa	ENSP00000451097.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KUM1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464394.1	CCDC176-005	689	124aa	ENSP00000451659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V488	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000492247.2	CCDC176-008	544	109aa	ENSP00000451020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V335	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000489323.1	CCDC176-006	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477986.2	CCDC176-007	703	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463558.2	CCDC176-004	550	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 3,106 bps, Translation length: 529 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8ND07

CCDS

This transcript is a member of the Human CCDS set: CCDS32119

Version

ENST00000394009.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000327863 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000394009.3 CCDC176-001

Summary