Transcript: ENST00000531295.1 TREH-004

Description

trehalase (brush-border membrane glycoprotein) [Source:HGNC Symbol;Acc:12266]

Gene Synonyms

MGC129621, TRE, TREA

Location

Chromosome 11: 118,530,518-118,550,355 reverse strand.

About this transcript

This transcript has 10 exons, is associated with 8477 variant alleles and maps to 369 oligo probes.

Gene

This transcript is a product of gene ENSG00000118094.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000264029.4	TREH-201	1851	582aa	ENSP00000264029.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O43280	NM_007180.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529101.1	TREH-001	2770	577aa	ENSP00000435095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PLW7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530256.1	TREH-003	1722	454aa	ENSP00000432640.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PPK1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525958.1	TREH-002	1717	546aa	ENSP00000432853.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PNA2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397925.1	TREH-202	1701	551aa	ENSP00000381020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7WPJ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531295.1	TREH-004	1521	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000527558.1	TREH-005	535	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 10, Coding exons: 0, Transcript length: 1,521 bps,

Version

ENST00000531295.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000389642 (version 1)

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Transcript: ENST00000531295.1 TREH-004

Summary