Transcript: ENST00000367742.3 PRRC2C-001

Description

proline-rich coiled-coil 2C [Source:HGNC Symbol;Acc:24903]

Gene Synonyms

BAT2-iso, BAT2D1, BAT2L2, KIAA1096, XTP2

Location

Chromosome 1: 171,454,690-171,562,650 forward strand.

About this transcript

This transcript has 34 exons, is annotated with 27 domains and features, is associated with 48242 variant alleles and maps to 1317 oligo probes.

Gene

This transcript is a product of gene ENSG00000117523.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000338920.4	PRRC2C-010	10355	2817aa	ENSP00000343629.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1296	Q9Y520	NM_015172.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367742.3	PRRC2C-001	10366	2819aa	ENSP00000356716.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EPN9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392078.3	PRRC2C-201	8978	2898aa	ENSP00000375928.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y520	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426496.2	PRRC2C-202	8540	2752aa	ENSP00000410219.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y520	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000495585.1	PRRC2C-002	5566	1300aa	ENSP00000420382.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000476522.1	PRRC2C-003	1931	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498596.1	PRRC2C-008	1066	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467601.1	PRRC2C-005	717	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492811.1	PRRC2C-009	379	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480806.1	PRRC2C-006	299	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470689.1	PRRC2C-011	224	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463586.1	PRRC2C-004	3771	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 34, Coding exons: 33, Transcript length: 10,366 bps, Translation length: 2,819 residues

Version

ENST00000367742.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000083864 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000367742.3 PRRC2C-001

Summary