Transcript: ENST00000346806.2 CTH-002

Description

cystathionase (cystathionine gamma-lyase) [Source:HGNC Symbol;Acc:2501]

Location

About this transcript

This transcript has 11 exons, is annotated with 10 domains and features, is associated with 11619 variant alleles and maps to 356 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370938.3	CTH-001	1805	405aa	ENSP00000359976.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS650	P32929	NM_001902.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411986.2	CTH-201	2044	373aa	ENSP00000413407.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53333	P32929	NM_001190463.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000346806.2	CTH-002	1196	361aa	ENSP00000311554.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS651	P32929	NM_153742.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464926.1	CTH-003	772	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482383.1	CTH-004	598	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,196 bps, Translation length: 361 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P32929

CCDS

This transcript is a member of the Human CCDS set: CCDS651

Version

ENST00000346806.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000025919 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.