Transcript: ENST00000461545.1 SOS1-005

Description

son of sevenless homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:11187]

Gene Synonyms

GF1, GGF1, GINGF, HGF, NS4

Location

Chromosome 2: 39,251,262-39,278,498 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 13407 variant alleles and maps to 110 oligo probes.

Gene

This transcript is a product of gene ENSG00000115904.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000426016.1	SOS1-001	8517	1333aa	ENSP00000387784.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1802	C9K0N6 Q07889 Q53SF8 Q9UKX9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402219.2	SOS1-201	8314	1333aa	ENSP00000384675.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1802	C9K0N6 Q07889 Q53SF8 Q9UKX9	NM_005633.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395038.2	SOS1-003	4123	1318aa	ENSP00000378479.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9K0N6 G5E9C8 Q59GG9 Q9UKX9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428721.2	SOS1-202	1469	314aa	ENSP00000399992.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DXG2 C9K0N6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451331.1	SOS1-004	579	102aa	ENSP00000393899.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9K0N6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000472480.1	SOS1-008	396	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474390.1	SOS1-006	672	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469581.1	SOS1-007	523	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461545.1	SOS1-005	441	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 441 bps,

Version

ENST00000461545.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000331651 (version 1)

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Transcript: ENST00000461545.1 SOS1-005

Summary