Transcript: ENST00000264158.8 RAB3GAP1-001

Description

RAB3 GTPase activating protein subunit 1 (catalytic) [Source:HGNC Symbol;Acc:17063]

Gene Synonyms

KIAA0066, P130, RAB3GAP, RAB3GAP130, WARBM1

Location

Chromosome 2: 135,809,835-135,928,276 forward strand.

About this transcript

This transcript has 24 exons, is annotated with 6 domains and features, is associated with 49673 variant alleles and maps to 882 oligo probes.

Gene

This transcript is a product of gene ENSG00000115839.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000442034.1	RAB3GAP1-002	4185	988aa	ENSP00000411418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54402	C9J837	NM_001172435.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000264158.8	RAB3GAP1-001	4914	981aa	ENSP00000264158.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33294	B9A6J2 D3DP75 Q15042	NM_012233.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539493.1	RAB3GAP1-201	3717	935aa	ENSP00000444306.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6H8Z3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425393.1	RAB3GAP1-003	1139	58aa	ENSP00000400761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J1R5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000487003.1	RAB3GAP1-004	3506	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489858.1	RAB3GAP1-006	557	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497080.1	RAB3GAP1-007	446	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 4,914 bps, Translation length: 981 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15042

CCDS

This transcript is a member of the Human CCDS set: CCDS33294

Version

ENST00000264158.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000337514 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000264158.8 RAB3GAP1-001

Summary