Transcript: ENST00000452104.1 PRKD3-008

Description

protein kinase D3 [Source:HGNC Symbol;Acc:9408]

Gene Synonyms

EPK2, PKC-NU, PKD3, PRKCN, nPKC-NU

Location

Chromosome 2: 37,483,841-37,499,566 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 7750 variant alleles and maps to 188 oligo probes.

Gene

This transcript is a product of gene ENSG00000115825.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379066.1	PRKD3-001	6111	890aa	ENSP00000368356.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1789	C9JKP8 O94806	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000234179.2	PRKD3-201	5900	890aa	ENSP00000234179.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1789	C9JKP8 O94806	NM_005813.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443187.1	PRKD3-004	695	181aa	ENSP00000401839.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JKP8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000452104.1	PRKD3-008	555	185aa	ENSP00000399540.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000443977.1	PRKD3-007	518	172aa	ENSP00000398743.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C172	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000477132.1	PRKD3-009	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494667.1	PRKD3-002	4326	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469275.1	PRKD3-003	2642	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475912.1	PRKD3-006	760	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464552.1	PRKD3-005	436	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 555 bps, Translation length: 185 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000452104.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000326527 (version 1)

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Transcript: ENST00000452104.1 PRKD3-008

Summary