Transcript: ENST00000421365.2 IFIH1-002

Description

interferon induced with helicase C domain 1 [Source:HGNC Symbol;Acc:18873]

Gene Synonyms

Hlcd, IDDM19, MDA-5, MDA5, RH116, RLR-2

Location

About this transcript

This transcript has 2 exons, is annotated with 6 domains and features, is associated with 4217 variant alleles and maps to 164 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263642.2	IFIH1-001	3595	1025aa	ENSP00000263642.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2217	Q53TB6 Q53TP4 Q9BYX4	NM_022168.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421365.2	IFIH1-002	1617	221aa	ENSP00000408450.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BYX4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464129.1	IFIH1-003	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,617 bps, Translation length: 221 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BYX4

Version

ENST00000421365.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000332983 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.