Transcript: ENST00000514567.1 TCERG1-009

Description

transcription elongation regulator 1 [Source:HGNC Symbol;Acc:15630]

Gene Synonyms

CA150, TAF2S, Urn1

Location

Chromosome 5: 145,882,982-145,886,740 forward strand.

About this transcript

This transcript has 5 exons, is associated with 1606 variant alleles and maps to 196 oligo probes.

Gene

This transcript is a product of gene ENSG00000113649.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296702.5	TCERG1-001	4654	1098aa	ENSP00000296702.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4282	O14776	NM_006706.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394421.2	TCERG1-007	3633	1077aa	ENSP00000377943.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43379	B7Z921 O14776	NM_001040006.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549332.1	TCERG1-016	3518	1032aa	ENSP00000450414.1	Nonsense mediated decay		G3V220	-	-
ENST00000509787.1	TCERG1-011	887	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514567.1	TCERG1-009	702	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510724.1	TCERG1-014	583	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503741.1	TCERG1-008	578	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000515203.1	TCERG1-004	576	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504116.1	TCERG1-006	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506524.1	TCERG1-002	3787	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000507175.1	TCERG1-012	1984	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511077.1	TCERG1-003	1846	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509810.1	TCERG1-013	784	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000513298.1	TCERG1-015	711	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514719.1	TCERG1-010	573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505285.1	TCERG1-005	486	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 702 bps,

Version

ENST00000514567.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000373452 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000514567.1 TCERG1-009

Summary